# ========= [INFO] ==========
# Mut inCB: not accepter mutation in BC
# Mut inMS: 2
# ReadIn  : 9-N3-12cycles-IDT.AC20.min3ReadByGrp.merged.withUMI.group.adjacency.consensusUnmapp.seq
# seq_deb : CTCGGTG
# seq_fin : TATGG
# MS_seq : AC
# excl : G,T
# nom  : AC20
# log  : 9-N3-12cycles-IDT.AC20.min3ReadByGrp.adjacency.AC20.seq.log
# =============================
#
# condiGrep: CTCG.TG.+.ATGG|CTCG.TG.+T.TGG|CTCG.TG.+TA.GG|CTCG.TG.+TAT.G|CTCG.TG.+TATG.|CTCGG.G.+.ATGG|CTCGG.G.+T.TGG|CTCGG.G.+TA.GG|CTCGG.G.+TAT.G|CTCGG.G.+TATG.|CTCGGT..+.ATGG|CTCGGT..+T.TGG|CTCGGT..+TA.GG|CTCGGT..+TAT.G|CTCGGT..+TATG.
# condiSet1: s/^.*CTCG.TG//g;s/^.*CTCGG.G//g;s/^.*CTCGGT.//g
# condiSet2: s/.ATGG.*$//g;s/T.TGG.*$//g;s/TA.GG.*$//g;s/TAT.G.*$//g;s/TATG..*$//g
# Pre-filtre ExactEnd: 1237 9-N3-12cycles-IDT.AC20.min3ReadByGrp.adjacency.AC20.seq.exactEachEnd.MS
# Pre-filtre MutInEnd: 37 9-N3-12cycles-IDT.AC20.min3ReadByGrp.adjacency.AC20.seq.Max1MutEachEnd.MS
# [Creat: 9-N3-12cycles-IDT.AC20.min3ReadByGrp.adjacency.AC20.seq.MS.all ] 1274 lines.
#
#> SophieMS_GenotyperMS_unProfil.r 9-N3-12cycles-IDT.AC20.min3ReadByGrp.adjacency.AC20.seq.MS.all.nb AC
#> SophieMS_GenotyperMS_unProfil_v2.r 9-N3-12cycles-IDT.AC20.min3ReadByGrp.adjacency.AC20.seq.exactEachEnd.MS.MS_noMut.nb 9-N3-12cycles-IDT.AC20.min3ReadByGrp.adjacency.AC20.seq.exactEachEnd.MS.MS_Mut.nb 9-N3-12cycles-IDT.AC20.min3ReadByGrp.adjacency.AC20.seq.Max1MutEachEnd.MS.MS_noMut.nb 9-N3-12cycles-IDT.AC20.min3ReadByGrp.adjacency.AC20.seq.Max1MutEachEnd.MS.MS_Mut.nb  AC  9-N3-12cycles-IDT.AC20.min3ReadByGrp.adjacency.AC20.seq.MS
# =============[ END ]===========
# [Creat: 9-N3-12cycles-IDT.AC20.min3ReadByGrp.adjacency.AC20.seq.MS.all.nb ]
# [Creat: 9-N3-12cycles-IDT.AC20.min3ReadByGrp.adjacency.AC20.seq.MS.all.profil.png ]
# [Creat: 9-N3-12cycles-IDT.AC20.min3ReadByGrp.adjacency.AC20.seq.MS.profil_v2.png ]
#
#nbRead	nbMSall	nb_EndnoMut_MSnoMut	nb_EndnoMut_MSMut	nb_EndMut_MSnoMut	nb_EndMut_MSMut
3430	1274	1229	8	36	1
